BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003G01SP1|AL425168
(992 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1801 1906 0.0
>3x_Contig1801
Length = 57606
Score = 1906 bits (954), Expect = 0.0
Identities = 980/994 (98%), Gaps = 2/994 (0%)
Strand = Plus / Minus
Query: 1 ttgtgawattcagccgaaagattaaagactggggaccctcctagactcccttcgttatta 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39439 ttgtgaaattcagccgaaagattaaagactggggaccctcctagactcccttcgttatta 39380
Query: 61 atkccatcatcatcagaaatgatgctatcaatatcgtcaactcggctcccaattacggga 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39379 attccatcatcatcagaaatgatgctatcaatatcgtcaactcggctcccaattacggga 39320
Query: 121 ctcatttgtkctatgakatttgagggttcttggatgtgtctaakattggkgggaaccggt 180
||||||||| |||||| |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 39319 ctcatttgttctatgatatttgagggttcttggatgtgtctaatattggtgggaaccggt 39260
Query: 181 gatttcatggaactattcatggttgaggcatcggtactgtcattcaactccataagtktc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 39259 gatttcatggaactattcatggttgaggcatcggtactgtcattcaactccataagtttc 39200
Query: 241 ttcatgttcagtgactctatttctgatatagacagtgcttctgaagccaacggtttagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39199 ttcatgttcagtgactctatttctgatatagacagtgcttctgaagccaacggtttagat 39140
Query: 301 tttcttaggccagtgtcgaggtttgtcctcacttctgacttcttcagactgatacctaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39139 tttcttaggccagtgtcgaggtttgtcctcacttctgacttcttcagactgatacctaag 39080
Query: 361 ccacgagtacctgcagaggttattgtatctttatkgattggacttccaaaagtactttca 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 39079 ccacgagtacctgcagaggttattgtatctttattgattggacttccaaaagtactttca 39020
Query: 421 tttctatcacttaggaaagckttaggtgagtctgctactgcgcacagagactgcacaaaa 480
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 39019 tttctatcacttaggaaagctttaggtgagtctgctactgcgcacagagactgcacaaaa 38960
Query: 481 ggcctccaatgtkgggaccaggccaacgtgtcatatggggttaaagccaaggtaacacca 540
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38959 ggcctccaatgttgggaccaggccaacgtgtcatatggggttaaagccaaggtaacacca 38900
Query: 541 tttcctgtcttcgtttctaagagaattgactttcttgattcgtcagcaattcgtagatcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38899 tttcctgtcttcgtttctaagagaattgactttcttgattcgtcagcaattcgtagatcc 38840
Query: 601 atgggtcttattgttgggaataacaacgtcctaccaatttgaaatagagggtcttgatat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38839 atgggtcttattgttgggaataacaacgtcctaccaatttgaaatagagggtcttgatat 38780
Query: 661 gctcccatatctatatktcttgtcaatcgcagaagtaattcatgggtttgttcattggtg 720
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38779 gctcccatatctatatttcttgtcaatcgcagaagtaattcatgggtttgttcattggtg 38720
Query: 721 tataagggcaaagtctgggtgttaaccttaaatatagccatgttcccattatctaaatga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38719 tataagggcaaagtctgggtgttaaccttaaatatagccatgttcccattatctaaatga 38660
Query: 781 aacagttcaacgcataaattctcataacgtaacttgtcacacgttattttgaaatagtct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38659 aacagttcaacgcataaattctcataacgtaacttgtcacacgttattttgaaatagtct 38600
Query: 841 cttttaatgacgctttccaaattgaacaatggaggagcaacgaaatcatgtgcatgagat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38599 cttttaatgacgctttccaaattgaacaatggaggagcaacgaaatcatgtgcatgagat 38540
Query: 901 aacaaatctttcacctggtcaaataacaagctttcacattgcactttattcc-attcctc 959
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 38539 aacaaatctttcacctggtcaaataacaagctttcacattgcactttattccaattcctc 38480
Query: 960 atgaaatggttckg-aaagacatcactctttgac 992
|||||||||||| | |||||||||||||||||||
Sbjct: 38479 atgaaatggttctgaaaagacatcactctttgac 38446
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6080
Number of Sequences: 1807
Number of extensions: 6080
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 992
length of database: 10,358,551
effective HSP length: 16
effective length of query: 976
effective length of database: 10,329,639
effective search space: 10081727664
effective search space used: 10081727664
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)